7. In experimental laboratory, the effect of epinephrine on glycogen mctabolismin a muscle tissue sample of the mutant mice line was studied. After adding6.8. The Metabolism of Ethanol in the Liver307epinephrine to the investigated medium CAMP concentration in the cellsincreased, but glycogen phosphorylase was present only in dephosphorylated,inactive form. Give the enzyme defect most likely in the mutant mice muscles?To solve the problem, answer the questions:a) can these animals perform sudden, intense work, for example, to run awayfrom danger?b) can these animals do moderate physical activity?c) argue the answers by making a scheme of the hormone action on glycogenmetabolism in the muscles.

Epinephrine is also known as adrenaline which is a hormone that is also used as a medication…

Answered: 7. In experimental laboratory, the…

Biochemistry

6th Edition

ISBN:9781305577206

Author:Reginald H. Garrett, Charles M. Grisham

Publisher:Reginald H. Garrett, Charles M. Grisham

Chapter25: Nitrogen Acquisition And Amino Acid Metabolism

Section: Chapter Questions

Problem 16P: A Deficiency on 3-Phosphogtycerate Dehydrogenase Can Affect Amino Acid Metabolism Although serine is...

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1. The second high energy intermediate metabolite of glycolysis that can be used for substrate level phosphorylation is also a precursor molecule for the synthesis of several amino acids. Name 5 of these amino acids. 2. Explain the indirect effect that allosteric effectors have on pyruvate dehydrogenase activity through phosphorylation/dephosphorylation of components within the PDH-complex.
5. Protein tyrosine phosphatase-1B (PTP1B) is an important enzyme regulating insulin signaling be- cause it catalyzes the hydrolysis of phosphorylated tyrosine residues on the insulin receptor and on insulin receptor substrates, proteins of approximately 200,000 molecular weight that serve as cell sig- naling intermediates. The reaction has been shown to adhere to the following mechanism in the scheme below: k3 E-P 2- E + AROPO, НОРО,* 2- E • AROPO, ArОH where ArOPO32- represents the phosphorylated aromatic group. (a) (. ) With p-nitrophenyl-phosphate (PNPP), a syn- thetic organic substrate under conditions [So] >> Eo], the traces illustrated in the diagram to the right were obtained whereby the optical density at 410 nm monitors the release of the p-nitrophenolate anion (see reaction scheme above) upon cleavage of the ArOPO32- substrate. What is this phe- nomenon called? What information does this observation 0.14 0.12 [PTP1]=0.054 mM 0.1 0.08 0.06 [PTP1]=0.027 mM 0.04 provide about…
19) Consider the table of allosteric effectors and their effect on the following metabolic processes. Glycolysis Gluconeogenesis PDH complex Krebs cycle acetyl-CoA Not applicable AMP Not applicable + glucagon Not applicable Not applicable - Each row contains one error. Correct the error in the table below Table 2 Correction (indicate process and effect (+ or -) acetyl-CoA AMP glucagon - Briefly explain the effect of each allosteric effector on the corrected pathway (based on Table 2 above)
Fructose 2,6-bisphosphate is a potent stimulator of phosphofructokinase. Explain how fructose 2,6-bisphosphate might function in the concerted model for allosteric enzymes.
2A. Red blood cells synthesize and degrade 2,3-bisphosphoglycerate (2,3-BPG) by a detour of the glycolytic pathway, as shown below: glyeeraldehyde 3-phosphate GAP dehydrogenase 1,3-bisphosphoglycerate bisphosphoglycerate mutase ADP phosphoglycerate kinase 2,3-bisphosphoglycerate ATP 3-phosphoglycerate 2,3-bisphosphoglycerate phosphatase phosphoglycerate mutase 2-phosphoglycerate (i) The bisphosphoglycerate mutase/2,3-bisphosphoglcerate phosphatase reaction is catalyzed by a single enzyme, BPGM. At alkaline pH, BPGM favors the mutase activity while at lower pH, BPGM favors the phosphatase reaction. Use this information, along with the Bohr effect, to explain in the space below how red blood cells respond to a metabolic defect where a patient experiences chronic, elevated levels of lactic acid. I (ii) Individuals with red blood cell phosphoglycerate kinase deficiency suffer from moderate hemolytic anemia (a condition where red blood cells self-destruct before their normal lifespan). They…
6. Glycogen synthase kinase 3 beta (GSK-3B) is a serine-threonine kinase known for its ability to regulate glycogen synthesis. In addition, it has been reported that GSK-3B plays important roles in many intracellular pathways and numerous pathologies, such as Alzheimer's disease and cancer. Inhibitors have been developed to modulate GSK-3ß activity and used as therapies. The kinetics of the enzyme (GSK-3B) with and without its inhibitor is shown in the plot below. B 1/v (sec/uM) 1/(S] (1/uM) a) Which line indicate the condition with inhibitor, line A or line B? b) What is the type of this inhibitor? Explain. c) Determine Vmax and Km for this enzyme in the inhibited state. Be sure to include the units.
Explain the indirect effect that allosteric effectors have on pyruvate dehydrogenase activity through phosphorylation/dephosphorylation of components within the PDH-complex. 2. The proton-motive force is a measure of the potential energy generated across the mitochondrial inner membrane during electron transport. Explain the factors that constitute this potential energy, that will be converted to the chemical energy of ATP by the cell.
It has been shown recently that the African naked GLUT5-.O Fructose (b) mole-rat can withstand up to 18 min of complete anoxia (ab- sence of O2) in the presence of high levels of CO2 without ap- parent brain damage. The basis of its capacity to tolerate such unusual conditions is that the brain, heart, and liver in the mole- rat switch to fructose-driven glycolysis. In contrast to normal mice, these tissues in the naked mole-rat have high levels of GLUT5 specific for cellular uptake of fructose. The available pathways for breakdown of fruct ose for metabolic energy production are shown on the right. KHK stands for ketohexosekinase, an enzyme that is markedly upregulated in the mole-rat compared to normal mice. Conse- quently mice must metabolize fructose largely via hexokinase (HK). In the diagram ALDOB, ALDOA, etc. represent aldolase isozymes. KHK HK Fructose-6-P PFK Fructose-1-P Fructose-1,6-BP ALDOA ALDOC ALDOB ALDOC Glyceraldehyde DHAP GAЗP Glyc-3-P 3-PGA Lactate Pyruvate mouse…
1. The enzyme glutamate dehydrogenase is important in the breakdown of amino acids to produce NH4+. High levels of NH4+ in the body are toxic, and for this reason it is used to form urea to be excreted in the urine. Using the information provided, calculate the delta G knot prime and the Keq value at 298K for the oxidation of glutamate catalyzed by glutamate dehydrogenase. (Constants: R=8.3J/degree.mol, F=96.1kJ/V.mol) How to identify the final and initial reactions in a group of redox reactions and do we reverse the reduction reaction if the question asks for oxidation?
3. Acetylcholinesterase is a serine hydrolase enzyme im- portant in nerve signal transmission, hydrolyzing acetylcho- line, an ester molecule with a positively charged quaternary nitrogen group. The structure of the physiologically relevant substrate of this enzyme is shown on the right. The quater- H₂C nary nitrogen group serves to anchor the molecule in the active site Gly121 Oxy- anion hole Gly122 Ala204 Substrate ACh His447 Catalytic triad Ser203 Glu202 Glu334 Ser229 CH3 N+ CH3 CH3 The a Scale document down rine protease family, consisting of a catalytic triad Ser203- His447-Glu334 with Ser203 supplying the nucleophilic hydroxyl group and an oxyanion hole com- prised of peptide NH groups of Gly121, Gly122, and Ala204, illustrated in the diagram above, for which carbon (green), nitrogen (blue), and oxygen (red) atoms are shown while hydrogen atoms are white. The enzyme catalyzed reaction can be represented by the following scheme: (a)( k1 K2 E + S = ES K-1 K3 EYE + P where ES…
The KMof the enzyme for the substrate adenosine is 3 × 10ꟷ5M. The product inosine acts as an inhibitor of the reaction, with an inhibition constant (KI, the dissociation constant for enzyme-inhibitor binding) of 3 × 10ꟷ4M. However, a transition state analog,Inhibits the reaction with KIof 1.5 × 10ꟷ13M. Explain why 1,6-dihydroinosine serves as a better inhibitor of adenosine deaminase than inosine. Elaborate on your answe
#1 Specify the role each of the following amino acids play within the crystal structure and/or active site for Be as specific as possible, with pictures (and mechanistic arrows) as necessary. His11 Arg140 Glu89 Trp68 #2 Provide a step-wise mechanism for the reaction Bisphosphoglycerate mutase catalyzes, using the amino acids responsible for aiding in catalysis. You do not need to add surrounding amino acids that aid in substrate specificity. (drawn out)

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